Pan module introduction

Pan module is one of the core modules of SPEED, containing scRNA-seq datasets for 122 species and the sc-WGS datasets for 16 mammalian species. On this page, the scRNA-seq datasets were grouped into nine classes according to different kingdoms and phyla. They are, in order, 38 mammals, 17 birds, 8 reptiles, 10 fish, 2 amphibians, 30 invertebrates, 4 protozoa, 6 plants and 5 microorganisms orders. The tenth class is the sc-WGS datasets of 16 mammalian species. This module allows the interactive exploration of each gene expression profile of 122 scRNA-seq datasets in ShinyCell and the SNPs and INDELs information of 16 sc-WGS datasets.

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